IIS6 (figure 1)
Website3   (integration login works)
    CommunityServer_RootFolder
    PublicStore
=================================
IIS6   (figure 2)
WebsiteCommunityServer (integration login doesn't work) (http://mysite.com)
    PublicStore
    .  
    .
    .
Website2
    PublicStore
=========================
for Community Server 2.1 integration, I have Community Server 2.1 as Website in IIS6 and access it by http://mysite.com, as (figure 2) shows. I run setup.exe to install mediachase and made it under Website2. It works. I the created PublicStore Vitual directly under WebsiteCommunityServer and did the configuration for integration but the login integration doesn't work.

got error:

Parser Error Message: Could not load file or assembly 'CommunityServer.Components' or one of its dependencies. The system cannot find the file specified.
(C:\Inetpub\wwwroot\CommunityServer\web.config line 58)

Line 58: 			<add name="CommunityServer" type="CommunityServer.CSHttpModule, CommunityServer.Components" />

Seems the PublicStore loading the web.config of Community Server.

But it works if I make it as (figure 1). The problem is then  I will have to use http://mysite.com/cs/ to access my site, which is what I don't want.

What should I do for this?

Thank you.